Plant Biology

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Datasets for evaluating FastqPuri and other RNA sequencing pre-processing tools.
Posted on 2019-04-16

All datasets

Data underlying the publication: Emerging trade-offs in saltmarsh ecosystem services under sea-level rise
Posted on 2025-04-22
Data underlying the publication: Predicting potato plant vigor from the seed tuber properties
Posted on 2025-05-21
Data underlying the publication: Predicting potato plant vigor from the seed tuber properties
Posted on 2025-01-07
Data underlying the publication "Loss of olfaction reduces caterpillar performance and increases susceptibility to a natural enemy"
Posted on 2024-11-22
Data presented in the paper: Subsidence reveals potential impacts of future sea level rise on inhabited mangrove coasts
Posted on 2023-08-29
Data presented in the paper: Subsidence reveals potential impacts of future sea level rise on inhabited mangrove coasts
Posted on 2023-09-11
Data for manuscript: Water motion influences carbon-use strategies of kelp forest assemblages and defines responses of macroalgae to ocean acidification
Posted on 2023-12-14
Data underlying the publication: Enhanced parasitisation of caterpillars and aphids on field-grown Brassica oleracea plants upon soil amendment with insect exuviae
Posted on 2024-03-21
Data underlying the publication: "Using salt marshes for coastal protection: effective but hard to get where needed most"
Posted on 2023-03-31
Data underlying the publication: Enhanced parasitisation of caterpillars and aphids on field-grown Brassica oleracea plants upon soil amendment with insect exuviae
Posted on 2024-03-20
Chlorophyll fluorescence data Yellowstone National Park (YNP) 2022
Posted on 2023-10-19
Data underlying the publication: Adaptive adhesive production systems in Zambia
Posted on 2023-06-08
A high spatial resolution Extended Spring Indices database over American and European regions
Posted on 2024-03-19
Dataset of scientific literature on Mozambican mangroves from 1962 to 2023
Posted on 2025-04-15
Insect egg-killing: a new front on the evolutionary arms-race between brassicaceous plants and pierid butterflies
Posted on 2023-04-03
Pieris brassicae egg-induced cell death of Brassica nigra is controlled by a single locus containing a cluster of TIR-NBS-LRR receptors
Posted on 2023-04-03
Hypersensitive response of Brassica plants against cabbage white butterfly eggs is specifically induced by egg-associated secretions
Posted on 2023-04-03
Data underlying the study: Addition of iron does not ameliorate sulfide toxicity by sargassum influx to mangroves but dampens methane and nitrous oxide emissions
Posted on 2023-09-22
Data underlying the study: Black mangrove seedlings have a direct dampening effect on increasing porewater pH: a mesocosm study
Posted on 2024-10-28
Data for Dandelion assembly used for comparative genomics of floral development
Posted on 2023-06-08
Data from: Early detection of phytophthora using hyperspectral imaging field experiment
Posted on 2024-01-30
Data from: Early detection of phytophthora using hyperspectral imaging field experiment
Posted on 2024-01-30
Data from: Early detection of phytophthora using hyperspectral imaging pot-tuber experiment
Posted on 2023-05-24
Data from: Early detection of phytophthora using hyperspectral imaging pot-leaf experiment.
Posted on 2023-05-24
Supplementary materials for PhD thesis: Comparative Genomics and Trait Evolution in Lettuce, its Wild Relatives and the Asteraceae
Posted on 2025-02-28
Data from: Early detection of phytophthora using hyperspectral imaging pot-tuber experiment
Posted on 2024-06-11
Data from: Early detection of phytophthora using hyperspectral imaging pot-leaf experiment.
Posted on 2024-06-11
Data underlying the publication: Predicting potato plant vigor from the seed tuber properties
Posted on 2024-10-29
Data underlying the publication: Impact of human disturbance on biogeochemical fluxes in tropical seascapes.
Posted on 2024-07-17
Supplemental Dataset 1 from the paper "Highly differentiated genomic properties underpin the different cell walls of Poaceae and eudicots"
Posted on 2023-04-21
Supplemental Dataset 2 from the paper "Highly differentiated genomic properties underpin the different cell walls of Poaceae and eudicots"
Posted on 2023-04-21
Data underlying the publication: Intraspecies variation offers potentials to improve white rot fungi for increasing degradability of lignocellulose for ruminants
Posted on 2023-11-07
Supplementary information: Analysis of natural variation in photosynthesis in a panel of Brassicaceae species
Posted on 2023-08-31
Supplementary Information: RNA-Seq analysis of Brassicaceae species under different irradiances
Posted on 2023-08-31
Supplementary information: Analysis of natural variation in photosynthesis in a panel of Brassicaceae species
Posted on 2023-10-25
Software supporting: RNA-Seq analysis of Brassicaceae species under different irradiances
Posted on 2023-08-17
Supplementary Information: RNA-Seq analysis of Brassicaceae species under different irradiances
Posted on 2024-07-23
Dataset: Structural, functional and evolutionary characterisation of genes in Lactuca sp. reference genomes in the context of eudicots
Posted on 2024-12-10
Data underlying: Expansion Microscopy Resolves the Thylakoid Structure of Spinach
Posted on 2023-11-02
Genome assembly and annotation files underlying the publication: The genome of Lupinus mutabilis: evolution and genetics of an emerging bio-based crop
Posted on 2024-03-20
Data underlying the paper: Planktonic primary production in the western Dutch Wadden Sea
Posted on 2020-10-30
Data for manuscript: Water motion influences carbon-use strategies of kelp forest assemblages and defines responses of macroalgae to ocean acidification
Posted on 2021-11-16
Supplementary material A: climatic information used to create BrazilClim
Posted on 2021-07-16
BrazilClim primary and bioclimatic surfaces
Posted on 2021-07-19
Data underlying publication: Neglecting acclimation of photosynthesis under drought can cause significant errors in predicting leaf photosynthesis in wheat
Posted on 2022-10-13
BrazilClim: script to gauge-calibrate the surfaces
Posted on 2021-08-27
Supplementary material B: Comparisons between the climatic data measured on-field and the predicted ones
Posted on 2021-07-16
Supplementary Material C. Spatial visualization of the discrepancies and the predictions
Posted on 2021-07-16
Data underlying the publication: Spectral Diversity of Photosystem I from Flowering Plants
Posted on 2022-10-21
Data underlying the publication: Single chloroplast in folio imaging sheds light on photosystem energy redistribution during state transitions
Posted on 2023-02-08
The complete chloroplast genome sequence of Corydalis yanhusuo
Posted on 2021-09-07
Data underlying the publication: Phytophthora pathogens exploit slicing action for host invasion
Posted on 2021-03-22
Data underlying the publication: Phytophthora pathogens exploit slicing action for host invasion
Posted on 2021-03-17
Data from the paper An actin mechanostat ensures hyphal tip sharpness in Phytophthora infestans to facilitate host entry.
Posted on 2022-04-04
Supplementary Dataset 2 from the paper "Syntenic cell wall QTLs as versatile breeding tools: intra-specific allelic variability and predictability of biomass quality loci in target plant species"
Posted on 2023-02-13
Data underlying Detection of latent potato late blight by hyperspectral imaging
Posted on 2021-08-09
Data underlying the publication: Origin and evolution of the cannabinoid oxidocyclase gene family
Posted on 2021-06-10
Data underlying the publication: The tomato cytochrome P450 CYP712G1 catalyzes the double oxidation of orobanchol en route to the rhizosphere signaling strigolactone, solanacol
Posted on 2022-05-25
Dataset of the RADseq data and genotyping from a panel of 123 hemp accessions
Posted on 2020-10-07
Dataset for the annotations of the transcriptome of the hemp cultivar C. sativa ‘Finola’ (finola1) and the marihuana cultivar C. sativa ‘Purple Kush’
Posted on 2020-10-21
Supplementary Dataset 1 from the paper "Highly differentiated genomic properties underpin the different cell walls of Poaceae and eudicots"
Posted on 2023-02-13
Data of the complete sequence of chloroplast genome of the Dendrobium chrysotoxum
Posted on 2022-04-06
Supplementary Dataset 2 from the paper "Highly differentiated genomic properties underpin the different cell walls of Poaceae and eudicots"
Posted on 2023-02-13
Genotyping data underlying the publication: Investigating the potential of Andean lupin as a lignocellulosic feedstock for Europe: first genome-wide association study on L. mutabilis biomass quality.
Posted on 2022-10-21
Data underlying the publication: Origin and evolution of the cannabinoid oxidocyclase gene family
Posted on 2020-12-21
Data underlying the publication: Origin and evolution of the cannabinoid oxidocyclase gene family
Posted on 2020-12-21
Data underlying the publication: Development of high frequency in vitro shoot regeneration system from leaves of apple cultivar Oregon Spur and optimization of antibiotics concentration
Posted on 2022-05-09
Data underlying article "Assessing biomass and primary production of microphytobenthos in depositional coastal systems using spectral information"
Posted on 2021-06-23
Supplementary Dataset 1 from the paper "Syntenic cell wall QTLs as versatile breeding tools: intra-specific allelic variability and predictability of biomass quality loci in target plant species"
Posted on 2023-02-13
Data presented in the paper “Tropical biogeomorphic seagrass landscapes for coastal protection: persistence and wave attenuation during major storm events“
Posted on 2020-05-29
Data presented in the paper “Water motion and vegetation control the pH dynamics in seagrass-dominated bays”
Posted on 2019-08-15
Tomato plant spider mite damage images
Posted on 2019-03-07
Three Magnolia species distribution data
Posted on 2018-07-19
Data presented in the paper "Understanding how leaf traits affect sediment stabilisation by seagrass: the effect of grazing and invasive species"
Posted on 2019-06-04
Data presented in the paper “Flow-divergence feedbacks control propagule retention by in-stream vegetation: the importance of spatial patterns for facilitation”
Posted on 2019-01-16
Arabidopsis thaliana wild-type RNA-seq
Posted on 2019-04-17
Data underlying the research on salt marsh seed retention, the seed bank and seed viability
Posted on 2019-10-24
Pelargonium geometric morphometric data
Posted on 2019-07-16
Data presented in the PhD thesis "Cucumber Mildew Resistance Identification of Cucumber Genes Involved in Susceptibility and Resistance to Powdery and Downy Mildew"
Posted on 2019-08-14
Supplemental files for the manuscript of 'Development of small InDels in kenaf (Hibiscus cannabinus) based on transcriptome sequences'
Posted on 2018-11-27
Data from: Apoplastic effectors, MAMPs and surface immune receptors- the battlefront of the Phytophthora infestans - potato interaction
Posted on 2018-09-20
Data underlying the publication: Effective integration of drone technology for mapping and managing palm species in the Peruvian Amazon, Madre de Dios Region (2019-2022)
Posted on 2025-03-06
Data underlying the article Basil Chilling Injury: Oxidative Stress or Energy Depletion
Posted on 2025-04-03
Data Underlying: Expansion Microscopy Reveals Thylakoid Organisation Alterations due to Genetic Mutations and Far-Red Light Acclimation
Posted on 2025-03-20
Data underlying the article Basil Chilling Injury: Oxidative Stress or Energy Depletion
Posted on 2024-12-13
Dataset underlying the study "Floodplain forests are sensitive to salt-intrusion during summer droughts when dominated by Salix"
Posted on 2025-06-04
Data Underlying: Expansion Microscopy Reveals Thylakoid Organisation Alterations due to Genetic Mutations and Far-Red Light Acclimation
Posted on 2025-01-28
Dataset underlying publication: CarboTag: a modular approach for live and functional imaging of plant cell walls
Posted on 2024-12-11
Data underlying the publication: Seed tuber microbiome is a predictor of next-season potato vigor
Posted on 2024-04-30
Data underlying the publication: Seed tuber microbiome is a predictor of next-season potato vigor
Posted on 2024-09-06
Data underlying the publication: Seed tuber microbiome is a predictor of next-season potato vigor
Posted on 2024-08-05
Data underlying the publication: Seed tuber microbiome is a predictor of next-season potato vigor
Posted on 2024-06-26
Data underlying the publication: First evidence of polyembryony in black mangrove Avicennia germinans.
Posted on 2024-07-17
Sequencing dataset genotyping of faba bean (Vicia Faba L.) accessions using targeted sequencing 90k-SPET
Posted on 2024-07-08
Data underlying the publication: Lactuca super-pangenome reduces bias towards reference genes in lettuce research
Posted on 2024-06-06