Data underlying the chapter Mechanistic insights in Lactobacillus brevis alcohol dehydrogenase: stability and active site role of Ser143 and Tyr156
doi: 10.4121/af778919-5f7a-4b39-ae6d-92b563d44063
This dataset contains data collected during experiments at Delft University of Technology, as chapter of the dissertation written by Ewald Jongkind. The aim of this work was to engineer an alcohol dehydrogenase from Lactobacillus brevis (LbADH), to enable reductive amination with this enzyme. Method consisted of docking studies of energy-minimized mutant enzymes designed with FuncLib, purifying these enzymes and screening the mutant enzymes for reductive amination. Dataset includes output files from the algorithm FuncLib, DNA sequences of the single mutant LbADHs, SDS-PAGEs showing the purification of all enzymes and the reaction screenings and activites of the enzymes, determined by UV-VIS, calculated in Excel. Dataset includes a draft Supporting information accompanied with the raw data used for this work.
- 2024-08-02 first online, published, posted
Uppsala University, Department of Chemistry
DATA
- 3,040 bytesMD5:
25741c1d14f835874055659b0ca9dafd
README4.txt - 2,708,987 bytesMD5:
10770f6b6eed2ed2bd4c2c079379e05c
2024-06-20 manuscript Jongkind ADH ESI draft.docx - 5,498,221 bytesMD5:
54c1ab5f0d644d90499e441b21be18df
Ch4E01 FuncLib output.zip - 22 bytesMD5:
76cdb2bad9582d23c1f6f4d868218d6c
Ch4E02 CloneManager A94D A94E LbADH alignment.zip - 16,325,801 bytesMD5:
4bab60f27d5867efc999c5221f8672ae
Ch4E03 SDS-PAGEs.zip - 186,589 bytesMD5:
724d61543bd6f9a206b03206ca4f6726
Ch4E04 activity assays.zip - 328,053 bytesMD5:
ccc7a535d332bff1ee709fc776a27ad5
Ch4E05 Conversions LbADH screening.zip -
download all files (zip)
25,050,713 bytes unzipped