Data underlying the publication: Reaction network analysis of organochloride mediated oxidation induced by ionizing radiation

doi:10.4121/0053e714-71c8-413e-acfe-bc9b1844f272.v1
The doi above is for this specific version of this dataset, which is currently the latest. Newer versions may be published in the future. For a link that will always point to the latest version, please use
doi: 10.4121/0053e714-71c8-413e-acfe-bc9b1844f272
Datacite citation style:
Liu, Juncheng; Xu, Bing; Uslamin, Evgeny; Eelkema, Rienk; Denkova, Antonia (2024): Data underlying the publication: Reaction network analysis of organochloride mediated oxidation induced by ionizing radiation. Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/0053e714-71c8-413e-acfe-bc9b1844f272.v1
Other citation styles (APA, Harvard, MLA, Vancouver, Chicago, IEEE) available at Datacite
Dataset

The generation of organoperoxy radical by irradiating aqueous solutions of organochlorides depends on the concentration of organochloride, where low concentration of organochloride results in low yield of peroxyl radical. The need of high concentration of organochloride limits the application in cancer therapy as most small molecule organochlorides show liver toxicity at elevated concentrations. To study if the oxidation is feasible at low concentration of organochloride, we proposed a reaction network where the effect of molecular oxygen is included. We hypothesized that oxygen competes with the organochloride to react with aqueous electrons, thereby causing a low yield of peroxyl radical at low organochloride concentrations. However, oxygen is necessary in the peroxyl radical formation pathway, which complicates straightforward prediction of reaction outcome. We developed a mathematic model to simulate the yield of peroxyl radical depending on organochloride and oxygen concentrations. The simulated results indicate that at low organochloride concentration, decreasing oxygen concentration leads to higher yield of peroxyl radical, with a peak at approximately 2% partial pressure of oxygen, and oxygen lower than 2% results in a sharp yield drop of peroxyl radical. Experiments using a thioether as reductant to quantify the peroxyl radical formation show good agreement with simulated data, verifying the proposed network. After irradiation in phosphate buffer saline/organochloride, a thioether caged dye showed a higher uncaging yield than the group without organochloride, demonstrating the viability of using thioether as a radiation sensitive group.

history
  • 2024-10-18 first online, published, posted
publisher
4TU.ResearchData
format
NMR DATA.mnova; plotted data.opju; exported graph.tif; code.ipynb
funding
  • China Scholarship Council (CSC)
organizations
TU Delft, Faculty of Applied Sciences, Department of Radiation Science & Technology

DATA

files (8)