Study	Disease	Reference
Son2015_ASD	ASD	"Son, J. et al. Comparison of fecal microbiota in children with autism spectrum disorders and neurotypical siblings in the simons simplex collection. PLoS ONE 10, e0137725 (2015)."
Kang2013_ASD	ASD	"Kang, D. W. et al. Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children.PLoS ONE8, e68322 (2013)."
Schubert2014_CDI	CDI	"Schubert, A. M. et al. Microbiome data distinguish patients with clostridium difficile infection and non-c. difficile-associated diarrhea from healthy controls. mBio 5, e0102114e0102114 (2014)."
Youngster2014_CDI	CDI	"Youngster, I. et al. Fecal microbiota transplant for relapsing clostridium difficile infection using a frozen inoculum from unrelated donors: a randomized, open-label, controlled pilot study. Clin. Infect. Dis. 58, 15151522 (2014)."
Baxter2016_CRC	CRC	"Baxter, N. T., Ruffin, M. T., Rogers, M. A. & Schloss, P. D. Microbiota-based model improves the sensitivity of fecal immunochemical test for detecting colonic lesions. Genome Med. 8, 37 (2016)."
Zackular2014_CRC	CRC	"Zackular, Joseph P., et al. The gut microbiome modulates colon tumorigenesis. MBio 4.6 (2013): e00692-13."
Zeller2014_CRC	CRC	"Zeller, G. et al. Potential of fecal microbiota for early-stage detection of colorectal cancer. Mol. Syst. Biol. 10, 766766 (2014)."
Singh2015_EDD	EDD	"Singh, P. et al. Intestinal microbial communities associated with acute enteric infections and disease recovery.Microbiome3, 45 (2015)."
NogueraJulian2016_HIV	HIV	"Noguera-Julian, M. et al. Gut microbiota linked to sexual preference and hiv infection. EBioMedicine 5, 135146 (2016)."
Dinh2015_HIV	HIV	"Dinh, D. M. et al. Intestinal microbiota, microbial translocation, and systemic inflammation in chronic HIV infection. J. Infect. Dis. 211, 1927 (2014)."
Lozupone2013_HIV	HIV	"Lozupone, C. A. et al. Alterations in the gut microbiota associated with hiv-1 infection. Cell Host Microbe 14, 329339 (2013)."
Gevers2014_IBD	IBD	"Gevers, D. et al. The treatment-naive microbiome in new-onset crohns disease. Cell Host Microbe 15, 382392 (2014)."
Zhang2013_LIV	LIV	"Zhang, Z. et al Large-scale survey of gut microbiota associated with MHE via 16s rRNA-based pyrosequencing. Am. J. Gastroenterol. 108, 16011611 (2013)."
Wong2013_NASH	NASH	"Wong, V. W. et al. Molecular characterization of the fecal microbiota in patients with nonalcoholic steatohepatitis  a longitudinal study. PLoS ONE 8, e62885 (2013)."
Ross2015_OB	OB	"Ross, M. C. et al. 16s gut community of the cameron county hispanic cohort. Microbiome 3, 7 (2015)."
Zupancic2012_OB	OB	"Zupancic, M. L. et al. Analysis of the gut microbiota in the old order Amish and its relation to the metabolic syndrome. PLoS ONE 7, e43052 (2012)."
Scher2013_PAR	PAR	"Scher, J. U. et al. Expansion of intestinal prevotella copri correlates with enhanced susceptibility to arthritis. eLife 2, e01202 (2013)."
Alkanani2015_T1D	T1D	"Alkanani, A. K. et al. Alterations in intestinal microbiota correlate with susceptibility to type 1 diabetes. Diabetes 64, 35103520 (2015)."
Scheperjans2015_PAR	PAR	"Scheperjans, F. et al Gut microbiota are related to parkinsons disease and clinical phenotype. Mov. Disord. 30, 350358 (2014)."
