MicroED/3DED - Info:"Position recovery skipped."
MicroED/3DED - Info:"Recovering position without visual feedback compensation."
MicroED/3DED - Info:"Switching to requested detector distance optics preset."
MicroED/3DED - Switch current diffraction optics default
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 525 (raw 0x820C), PLA Y: -103 (raw 0x7F98), SA 50um
DETECTOR DISTANCE (MM):  647.00000 ->   647.00000
MicroED/3DED - Info:"Primary beam - PLA alignment procedure."
***********************Automatic primary beam PLA deflector adjustment, STARTED***********************
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 50um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 525 / -103 (raw 0x820C/0x7F98) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
Instrument: SynergyED IL1 internal relaxation procedure with high/low set values [D2AF/0000] and 500 ms wait time.
Instrument: SynergyED CL3 internal relaxation procedure with high/low set values [E72A/990A] and 300 ms wait time.
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 525 (raw 0x820C), PLA Y: -103 (raw 0x7F98), SA 50um
Generic modular alignment function will run on given settings: Using 'PLA deflectors' and 'Primary beam peak recognition algorithm' to align at X/Y 387.5/192.5 (+-0.50 error) position with 6 trials and 125 ms stabilization wait time. 
CAMHYPIX INFO: overflow threshold = 520122 (max cps = 1048000)
Primary beam initial error X: 2.355 Y: 1.137. Adjustment required...
Instrument: SynergyED Applying PLA X/Y = 494 / -96 (raw 0x81ED/0x7F9F) ...
Deflector centering error from current 0.179 0.022
Saving new PLA 493/-99 (raw 0x81EC/0x7F9C) for diffraction preset - 650 mm Standard
MicroED/3DED - Switch current diffraction optics default
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 493 (raw 0x81EC), PLA Y: -99 (raw 0x7F9C), SA 50um
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 50um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 493 / -99 (raw 0x81EC/0x7F9C) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 493 (raw 0x81EC), PLA Y: -99 (raw 0x7F9C), SA 50um
DETECTOR DISTANCE (MM):  647.00000 ->   647.00000
***********************Automatic primary beam PLA deflector adjustment, FINISHED***********************
MicroED/3DED - Info:"Applies proper diffraction optics preset"
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 50um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 493 / -99 (raw 0x81EC/0x7F9C) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 493 (raw 0x81EC), PLA Y: -99 (raw 0x7F9C), SA 50um
MicroED/3DED - Info:"Measurement - Main data collection."
DC SCONCURRENTQUEUE "D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\exp_7299"
DC INFO: DC settings kept unchanged (ini file not found)
Collision check at 647.000mm
Collision test: OK
DC S INFO: 'Shutterless dc' in use!
DC WARNING: software trigger in use!
DELETE INFO: Deleting experimental images... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\frames\exp_7299*.rodhypix)
DELETE INFO: Deleting bgfiles in tmp directory... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\tmp\exp_7299*.*)
Checking detector frame frequency (desired value 1.00Hz)
Detector frame frequency adjusted to shortest exposure time (4.00Hz)
Going to -63.000000
GONIO INFO: Goto angle JEOL STAGE with inconsistent angles
Is:-63.3017 (-633017) 
Should:-63.0000 (-630000) 
For further information on messages from the goniometer see: file:__#HELP_EReferenceSection_Issues_ITS_051.html
WD P/CAL INFO: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\bup\exp_7299Thu-Sep-19-12-55-32-2024.bup written
 
Instrument model: dd: 647.00, x0: 387.50, y0: 192.50, beam: 0.00, o0: 0.00, t0: 0.00, k0: 0.00
 
WD P/CAL INFO: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\exp_7299.par written
 
Instrument model: dd: 647.00, x0: 387.50, y0: 192.50, beam: 0.00, o0: 0.00, t0: 0.00, k0: 0.00
 
DC INFO: ccd file saved: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\MicroED_HyPix_2024-03-26_CG.ccd
DC INFO: C:\Xcalibur\corrections\od_microED\HyPix_2005220618\MicroED_HyPix_2024-03-26_CG.ccd copied
DELETE INFO: Deleting data red ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\expinfo\exp_7299_datared.ini)
DELETE INFO: Deleting crystal ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\expinfo\exp_7299_crystal.ini)
DELETE INFO: Deleting rrp ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\expinfo\exp_7299_rrp.ini)
DELETE INFO: Deleting data collection ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\expinfo\exp_7299_datacoll.ini)
Run list: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\exp_7299
Frames folder: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7299\frames
