MicroED/3DED - Info:"Position recovery skipped."
MicroED/3DED - Info:"Recovering position without visual feedback compensation."
MicroED/3DED - Info:"Switching to requested detector distance optics preset."
MicroED/3DED - Switch current diffraction optics default
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 517 (raw 0x8204), PLA Y: -111 (raw 0x7F90), SA 100um
DETECTOR DISTANCE (MM):  647.00000 ->   647.00000
MicroED/3DED - Info:"Primary beam - PLA alignment procedure."
***********************Automatic primary beam PLA deflector adjustment, STARTED***********************
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 100um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 517 / -111 (raw 0x8204/0x7F90) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
Instrument: SynergyED IL1 internal relaxation procedure with high/low set values [D2AF/0000] and 500 ms wait time.
Instrument: SynergyED CL3 internal relaxation procedure with high/low set values [E72A/990A] and 300 ms wait time.
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 517 (raw 0x8204), PLA Y: -111 (raw 0x7F90), SA 100um
Generic modular alignment function will run on given settings: Using 'PLA deflectors' and 'Primary beam peak recognition algorithm' to align at X/Y 387.5/192.5 (+-0.50 error) position with 6 trials and 125 ms stabilization wait time. 
CAMHYPIX INFO: overflow threshold = 520122 (max cps = 1048000)
Primary beam initial error X: 1.075 Y: 0.510. Adjustment required...
Instrument: SynergyED Applying PLA X/Y = 527 / -100 (raw 0x820E/0x7F9B) ...
Deflector centering error from current 0.414 0.166
Saving new PLA 525/-103 (raw 0x820C/0x7F98) for diffraction preset - 650 mm Standard
MicroED/3DED - Switch current diffraction optics default
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 525 (raw 0x820C), PLA Y: -103 (raw 0x7F98), SA 100um
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 100um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 525 / -103 (raw 0x820C/0x7F98) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 525 (raw 0x820C), PLA Y: -103 (raw 0x7F98), SA 100um
DETECTOR DISTANCE (MM):  647.00000 ->   647.00000
***********************Automatic primary beam PLA deflector adjustment, FINISHED***********************
MicroED/3DED - Info:"Applies proper diffraction optics preset"
Instrument: SynergyED Applying Condenser range=Low...
Instrument: SynergyED Applying CL 30um...
Instrument: SynergyED Applying SA 100um...
Instrument: SynergyED Applying diff 50CM...
Instrument: SynergyED Applying SpotSize=1...
Instrument: SynergyED Applying ILFocus=52AF...
Instrument: SynergyED Applying PLA X/Y = 525 / -103 (raw 0x820C/0x7F98) ...
Instrument: SynergyED Applying CL3 Illumination defocus=C01A...
MicroED/3DED Diffraction preset (650 mm Standard): Illumination: Condenser strength 1, Low Condenser range, CL3 Illumination defocus  33% (0xC01A), CL 30um
Projection: Magnification diff 50CM, IL1 Projection focus: 0x52AF (21167), PLA X: 525 (raw 0x820C), PLA Y: -103 (raw 0x7F98), SA 100um
MicroED/3DED - Info:"Measurement - Main data collection."
DC SCONCURRENTQUEUE "D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\exp_7297"
DC INFO: DC settings kept unchanged (ini file not found)
Collision check at 647.000mm
Collision test: OK
DC S INFO: 'Shutterless dc' in use!
DC WARNING: software trigger in use!
DELETE INFO: Deleting experimental images... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\frames\exp_7297*.rodhypix)
DELETE INFO: Deleting bgfiles in tmp directory... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\tmp\exp_7297*.*)
Checking detector frame frequency (desired value 1.00Hz)
Detector frame frequency adjusted to shortest exposure time (4.00Hz)
Going to -60.000000
GONIO INFO: Goto angle JEOL STAGE with inconsistent angles
Is:-60.4004 (-604004) 
Should:-60.0000 (-600000) 
For further information on messages from the goniometer see: file:__#HELP_EReferenceSection_Issues_ITS_051.html
WD P/CAL INFO: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\bup\exp_7297Thu-Sep-19-12-07-45-2024.bup written
 
Instrument model: dd: 647.00, x0: 387.50, y0: 192.50, beam: 0.00, o0: 0.00, t0: 0.00, k0: 0.00
 
WD P/CAL INFO: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\exp_7297.par written
 
Instrument model: dd: 647.00, x0: 387.50, y0: 192.50, beam: 0.00, o0: 0.00, t0: 0.00, k0: 0.00
 
DC INFO: ccd file saved: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\MicroED_HyPix_2024-03-26_CG.ccd
DC INFO: C:\Xcalibur\corrections\od_microED\HyPix_2005220618\MicroED_HyPix_2024-03-26_CG.ccd copied
DELETE INFO: Deleting data red ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\expinfo\exp_7297_datared.ini)
DELETE INFO: Deleting crystal ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\expinfo\exp_7297_crystal.ini)
DELETE INFO: Deleting rrp ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\expinfo\exp_7297_rrp.ini)
DELETE INFO: Deleting data collection ini... (D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\expinfo\exp_7297_datacoll.ini)
Run list: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\exp_7297
Frames folder: D:\Khai\Delft\SAN14-2\MIL-53-5NH295CH3\exp_7297\frames
