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Data for publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study

DOI:10.4121/b7d5d108-4832-4f22-a11d-7c8f89ebdebf.v1
The DOI displayed above is for this specific version of this dataset, which is currently the latest. Newer versions may be published in the future. For a link that will always point to the latest version, please use
DOI: 10.4121/b7d5d108-4832-4f22-a11d-7c8f89ebdebf

Datacite citation style

Pillay, Stephanie; Calderon Franco, David; Thomas Abeel (2024): Data for publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study. Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/b7d5d108-4832-4f22-a11d-7c8f89ebdebf.v1
Other citation styles (APA, Harvard, MLA, Vancouver, Chicago, IEEE) available at Datacite

Dataset

Data used/generated in the publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study.

Metagenomic data was generated using nanopore sequencing from lake water, retail meat products and sludge using a modified and unmodified DNA extraction protocol. Data has been uploaded to a publicly available repository (ncbi) under the accession number PRJNA1168083.

History

  • 2024-12-09 first online, published, posted

Publisher

4TU.ResearchData

Funding

  • NRF-NUFFIC Doctoral Scholarship [more info...] National Research Foundation South Africa

Organizations

TU Delft, Faculty of Electrical Engineering, Mathematics and Computer Science, The Delft Bioinformatics Lab