Data underlying the publication "Genetic Mapping of the Root Mycobiota in rice and its Role in Drought Tolerance"
DOI:10.4121/9526a9b6-0690-4829-aed5-e4b88734e6c1.v1
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DOI: 10.4121/9526a9b6-0690-4829-aed5-e4b88734e6c1
DOI: 10.4121/9526a9b6-0690-4829-aed5-e4b88734e6c1
Datacite citation style
te Beest, Dennis; Kruijer, Willem; Vannier, Nathan; Kadam, Niteen; Andreo Jimenez, Beatriz (2023): Data underlying the publication "Genetic Mapping of the Root Mycobiota in rice and its Role in Drought Tolerance". Version 1. 4TU.ResearchData. dataset. https://doi.org/10.4121/9526a9b6-0690-4829-aed5-e4b88734e6c1.v1
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Dataset
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Time coverage 2013
Licence CC BY 4.0
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Microbial and genomic data from root samples from rice plants grown under flooded and drought conditions, to unravel the genetic factors involved in the rice-microbe interaction, and whether genetics play a role in rice drought tolerance. Root mycobiota was characterized (18S SSU rRNA) in 296 rice accessions (Oryza sativa L. subsp. indica) under control and drought conditions. Genome wide association mapping (GWAS) resulted in the identification of ten significant single nucleotide polymorphisms (SNPs) associated with root-associated fungi.
History
- 2023-05-24 first online, published, posted
Publisher
4TU.ResearchDataAssociated peer-reviewed publication
Genetic Mapping of the Root Mycobiota in Rice and its Role in Drought ToleranceOrganizations
Wageningen University & Research, Biointeractions and Plant HealthUniversite de Rennes I, EcoBio
DATA
Files (16)
- 3,083 bytesMD5:
7b951382ffd2896d4c10e37f5a438418README_Andreo-Jimenez_et_al_2023.txt - 88,314 bytesMD5:
95c0de287c34a886172338b654939bf0Control.OTU_0001.pdf - 89,494 bytesMD5:
e3071e921afb32b4dc53c16fb9139551Drought.OTU_0002.pdf - 88,292 bytesMD5:
dc1c84097a15fa6504632493cfbb9024Drought.OTU_0007.pdf - 86,704 bytesMD5:
b40481484449ce0d6097094debc694e9Drought.OTU_0011.pdf - 86,001 bytesMD5:
93bfe8b0cf90173060a11ec5215b351eDrought.OTU_0015.pdf - 87,055 bytesMD5:
ff2e25f651448035d978ef6fb29c3baaDrought.OTU_0019.pdf - 3,190 bytesMD5:
836d714a6a19f89fe745cc61c2c04f6fgenotypes_in_our_study.txt - 3,122 bytesMD5:
4618977d49ee2a89ebbc9a95459de9ecLD_selection_20220301.R - 10,293,661 bytesMD5:
b5bf0a358d344b33f3d887a1a3dd4963rice_90k.RData - 88,225 bytesMD5:
5d8b96f3a1d9b3737869f199018e0448scorecontrol.pdf - 89,508 bytesMD5:
9654bde7118c46c16b2abdc018360ab7scoredrought.pdf - 945 bytesMD5:
24f30d7c5eb5b344d99f7e79a23597f7SNPs_75K_windows_multi_gwas_LOD4_topSNPs.txt - 3,231,177 bytesMD5:
b635ccb3b55c1af8a240e1769c9870b2supplementary_information_file2.csv - 1,148,684 bytesMD5:
190d7ec0b5a4005c4cd41e9911ce5467supplementary_information_file3.csv - 58,214 bytesMD5:
f02181256e1e42dd9b46ee9f6624303asupplementary_information_file4.xlsx -
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