Data for "Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae"
doi:10.4121/19237146.v2
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doi: 10.4121/19237146
doi: 10.4121/19237146
Datacite citation style:
Viola Kurm; Odette Mendes; Jack Gros; Jan van der Wolf (2023): Data for "Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae". Version 2. 4TU.ResearchData. dataset. https://doi.org/10.4121/19237146.v2
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Dataset
choose version:
version 2 - 2023-10-04 (latest)
version 1 - 2022-03-01
usage stats
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categories
geolocation
Munnekezijl and Kollumerzwaag, Netherlands
time coverage
2018 and 2019
licence
CC BY 4.0
In this study differences in disease incidence between potato seed lots inoculated with soft rot Pectobacteriaceae were assessed in two years.
Subsequently the microbial communities in tubers and soils from seed lots with a low and high disease incidence were determined by amplicon sequencing.
history
- 2022-03-01 first online
- 2023-10-04 published, posted
publisher
4TU.ResearchData
format
csvxlsxtxt
associated peer-reviewed publication
Potato tuber origin and microbial composition determines resistance against soft rot Pectobacteriaceae
organizations
Biointeractions and Plant Health, Wageningen University & ResearchAgrico
DATA
files (19)
- 2,287 bytesMD5:
a5380d0b143123d2e10308f9458319c1README(3).txt - 1,211 bytesMD5:
0a19b028ee49ccca54e82e8cf16b636dDescription of Disease incidence data 2018,2019 project Potato resistance2.csv - 3,903 bytesMD5:
a556ce834e0f747969ae18597db49320Description OTU and taxa tables2.csv - 14,931 bytesMD5:
9bde6c0546345e681ea7508000e00513Disease incidence data 2018 project Potato resistance2.csv - 20,946 bytesMD5:
f3dfd4e31abc5912a0b288f7efdc35c2Disease incidence data 2019 project Potato resistance.csv - 5,105 bytesMD5:
17bf772592a51ce8fa1159d2d5df572bMetadata.csv - 1,584,057 bytesMD5:
bb44568d29abd5744e3b44db79f9db27OTU_16S_20182019_Tuber.csv - 737,417 bytesMD5:
592d5e9f555d90166adfed54a53707f2OTU_16S_2019_Soil.csv - 1,621,351 bytesMD5:
01a34713813f7f632b4efde78290960fOTU_16S_2019_SoilandTuber.csv - 394,385 bytesMD5:
77eba99d36f1132570ce0fde6d3396e0OTU_16S_2019_Tuber.csv - 103,756 bytesMD5:
1994eede9607500459b1d6663e222d23OTU_ITS_20182019_Tuber.csv - 1,061,864 bytesMD5:
f50b8a00d207a79b93e2fc5be2b558fdOTU_ITS_2019_Soil.csv - 22,786 bytesMD5:
2e6017672a9ee450bd8bda324f60a589OTU_ITS_2019_Tuber.csv - 407,339 bytesMD5:
00a4c474887ef3c592f90f13be751c27Taxa_16S_20182019.csv - 328,066 bytesMD5:
709ec6aa6e83cac1c4082244920ae1b2Taxa_16S_2019_Soil.csv - 273,574 bytesMD5:
0b4e2a3e874c06a1d382281f47852265Taxa_16S_2019_Tuber.csv - 30,219 bytesMD5:
2a1e0fcaef00cedba56c97ca8088efdeTaxa_ITS_20182019.csv - 108,407 bytesMD5:
1aa4782ba36e6f357980cc335a78a3e5Taxa_ITS_2019_Soil.csv - 64,775 bytesMD5:
46725958fa3338c26525301237aebeddTaxa_ITS_2019_Tuber.csv -
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